Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gas vesicle protein gvpj | YT1_RS07220 | Not Available | Negative | 1318360 - 1318770 | 13988.6 |
| wax ester/triacylglycerol synthase family o-acyltransferase | YT1_RS07225 | Not Available | Positive | 1319132 - 1320517 | 49650.3 |
| dead/deah box helicase | YT1_RS07230 | Not Available | Negative | 1320477 - 1322792 | 82688.8 |
| organic hydroperoxide resistance protein | YT1_RS07235 | Not Available | Negative | 1322835 - 1323257 | 14650.2 |
| marr family winged helix-turn-helix transcriptional regulator | YT1_RS07240 | Not Available | Negative | 1323283 - 1323741 | 16768.0 |
| atp-dependent clp protease atp-binding subunit | YT1_RS07245 | Not Available | Positive | 1323891 - 1326317 | 88098.6 |
| maltokinase n-terminal cap-like domain-containing protein | YT1_RS07250 | Not Available | Negative | 1326385 - 1327782 | 50939.0 |
| maltose alpha-d-glucosyltransferase | YT1_RS07255 | Not Available | Negative | 1327779 - 1329500 | 66061.8 |
| 3-deoxy-7-phosphoheptulonate synthase | YT1_RS07260 | Not Available | Positive | 1330101 - 1331183 | 38430.5 |
| glycosyltransferase | YT1_RS07265 | Not Available | Positive | 1331272 - 1332153 | 33311.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


