Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | YT1_RS07170 | Not Available | Negative | 1308035 - 1308955 | 34414.2 |
| universal stress protein | YT1_RS07175 | Not Available | Positive | 1309053 - 1309913 | 29674.2 |
| site-2 protease family protein | YT1_RS07180 | Not Available | Negative | 1309917 - 1311125 | 41110.4 |
| universal stress protein | YT1_RS07185 | Not Available | Negative | 1311092 - 1311991 | 31274.4 |
| alpha/beta hydrolase | YT1_RS07190 | Not Available | Positive | 1312122 - 1313123 | 35896.6 |
| oxidoreductase | YT1_RS07195 | Not Available | Positive | 1313116 - 1313994 | 31205.1 |
| oxidoreductase | YT1_RS07200 | Not Available | Positive | 1314171 - 1315040 | 31012.0 |
| potassium channel family protein | YT1_RS07205 | Not Available | Negative | 1315051 - 1316121 | 38345.2 |
| potassium channel family protein | YT1_RS07210 | Not Available | Negative | 1316220 - 1316885 | 23656.6 |
| trkh family potassium uptake protein | YT1_RS07215 | Not Available | Negative | 1316878 - 1318254 | 48200.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


