Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had-ib family hydrolase | YT1_RS07120 | Not Available | Negative | 1295886 - 1297313 | 51421.4 |
| glycerol-3-phosphate 1-o-acyltransferase | YT1_RS07125 | Not Available | Negative | 1297310 - 1299661 | 87609.6 |
| bifunctional aminoglycoside phosphotransferase/atp-binding protein | YT1_RS07130 | Not Available | Positive | 1299832 - 1301313 | 53495.5 |
| vit family protein | YT1_RS07135 | Not Available | Positive | 1301366 - 1302091 | 24514.6 |
| universal stress protein | YT1_RS07140 | Not Available | Negative | 1302131 - 1303024 | 31005.1 |
| zinc-binding alcohol dehydrogenase family protein | YT1_RS07145 | Not Available | Negative | 1303077 - 1304096 | 35818.6 |
| cyth and chad domain-containing protein | YT1_RS07150 | Not Available | Negative | 1304199 - 1305725 | 57262.8 |
| flavodoxin domain-containing protein | YT1_RS07155 | Not Available | Positive | 1305953 - 1306486 | 18988.2 |
| acg family fmn-binding oxidoreductase | YT1_RS07160 | Not Available | Positive | 1306476 - 1307483 | 35821.2 |
| srpbcc domain-containing protein | YT1_RS07165 | Not Available | Negative | 1307499 - 1308005 | 18987.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


