Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate signaling complex protein phou | YT1_RS06915 | Not Available | Negative | 1260447 - 1261154 | 26247.6 |
| lcp family protein | YT1_RS06920 | Not Available | Negative | 1261238 - 1263088 | 64498.6 |
| trna dihydrouridine synthase dusb | YT1_RS06925 | Not Available | Negative | 1263393 - 1264535 | 40774.8 |
| acyl-acp desaturase | YT1_RS06930 | Not Available | Negative | 1264656 - 1265612 | 36305.0 |
| duf937 domain-containing protein | YT1_RS06935 | Not Available | Negative | 1265831 - 1266415 | 18934.4 |
| hypothetical protein | YT1_RS06940 | Not Available | Negative | 1266474 - 1266917 | 14813.2 |
| hypothetical protein | YT1_RS06945 | Not Available | Positive | 1267080 - 1267658 | 20766.4 |
| Trna-lys | Not Available | Not Available | Positive | 1267743 - 1267815 | Not Available |
| tetr/acrr family transcriptional regulator | YT1_RS06955 | Not Available | Positive | 1268045 - 1268698 | 23841.2 |
| Trna-glu | Not Available | Not Available | Positive | 1268797 - 1268869 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


