Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase | YT1_RS06865 | Not Available | Negative | 1251547 - 1252383 | 31436.4 |
| duf4395 domain-containing protein | YT1_RS06870 | Not Available | Negative | 1252445 - 1252927 | 16348.1 |
| thioredoxin family protein | YT1_RS06875 | Not Available | Negative | 1253173 - 1253619 | 15188.6 |
| lmea family phospholipid-binding protein | YT1_RS06880 | Not Available | Negative | 1253616 - 1254395 | 26933.2 |
| winged-helix domain-containing protein | YT1_RS06885 | Not Available | Positive | 1254523 - 1255251 | 25773.8 |
| mycothiol synthase | YT1_RS06890 | Not Available | Positive | 1255261 - 1256157 | 32128.1 |
| phosphate abc transporter substrate-binding protein psts | YT1_RS06895 | Not Available | Positive | 1256396 - 1257514 | 37579.2 |
| phosphate abc transporter permease subunit pstc | YT1_RS06900 | Not Available | Positive | 1257573 - 1258628 | 36614.9 |
| phosphate abc transporter permease psta | YT1_RS06905 | Not Available | Positive | 1258633 - 1259541 | 31833.3 |
| phosphate abc transporter atp-binding protein pstb | YT1_RS06910 | Not Available | Positive | 1259594 - 1260370 | 28249.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


