Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygfz/gcvt domain-containing protein | YT1_RS06805 | Not Available | Negative | 1238659 - 1239789 | 39980.5 |
| aminodeoxychorismate lyase | YT1_RS06810 | Not Available | Positive | 1239844 - 1240689 | 30160.8 |
| cytochrome ubiquinol oxidase subunit i | YT1_RS06815 | Not Available | Positive | 1240902 - 1242398 | 55075.7 |
| cytochrome d ubiquinol oxidase subunit ii | YT1_RS06820 | Not Available | Positive | 1242409 - 1243446 | 37661.4 |
| thiol reductant abc exporter subunit cydd | YT1_RS06825 | Not Available | Positive | 1243443 - 1245374 | 67159.2 |
| thiol reductant abc exporter subunit cydc | YT1_RS06835 | Not Available | Positive | 1245374 - 1247035 | 56504.1 |
| bcct family transporter | YT1_RS06845 | Not Available | Positive | 1247350 - 1249062 | 61369.2 |
| fabp family protein | YT1_RS06850 | Not Available | Negative | 1249050 - 1249721 | 24083.0 |
| cutinase family protein | YT1_RS06855 | Not Available | Positive | 1249950 - 1251185 | 44335.2 |
| duf1416 domain-containing protein | YT1_RS06860 | Not Available | Negative | 1251239 - 1251544 | 10294.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


