Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uma2 family endonuclease | YT1_RS06755 | Not Available | Positive | 1227569 - 1228180 | 22121.3 |
| phosphoribosylformylglycinamidine synthase subunit purl | YT1_RS06760 | Not Available | Positive | 1228246 - 1230552 | 81584.8 |
| alpha/beta hydrolase | YT1_RS06765 | Not Available | Positive | 1230556 - 1232328 | 64388.0 |
| cpbp family intramembrane glutamic endopeptidase | YT1_RS06770 | Not Available | Positive | 1232325 - 1233008 | 23462.5 |
| sterol carrier family protein | YT1_RS06775 | Not Available | Positive | 1233020 - 1233406 | 13587.4 |
| amidophosphoribosyltransferase | YT1_RS06780 | Not Available | Positive | 1233523 - 1235109 | 56346.0 |
| phosphoribosylformylglycinamidine cyclo-ligase | YT1_RS06785 | Not Available | Positive | 1235285 - 1236358 | 37371.9 |
| duf3073 domain-containing protein | YT1_RS06790 | Not Available | Negative | 1236624 - 1236833 | 7900.86 |
| asparaginase | YT1_RS06795 | Not Available | Negative | 1237017 - 1237991 | 33748.4 |
| mosc domain-containing protein | YT1_RS06800 | Not Available | Negative | 1237988 - 1238662 | 24413.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


