Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2334 domain-containing protein | YT1_RS06655 | Not Available | Positive | 1206251 - 1206955 | 25757.3 |
| fad-binding dehydrogenase | YT1_RS06660 | Not Available | Positive | 1207004 - 1208647 | 59385.9 |
| mbl fold metallo-hydrolase | YT1_RS06665 | Not Available | Negative | 1208702 - 1209346 | 23015.2 |
| flavodoxin family protein | YT1_RS06670 | Not Available | Negative | 1209449 - 1209985 | 19002.1 |
| carboxylesterase/lipase family protein | YT1_RS06675 | Not Available | Positive | 1210138 - 1211616 | 50887.2 |
| hypothetical protein | YT1_RS06680 | Not Available | Negative | 1211748 - 1212464 | 26731.5 |
| heavy metal translocating p-type atpase | YT1_RS06685 | Not Available | Negative | 1212550 - 1214790 | 77995.0 |
| heavy-metal-associated domain-containing protein | YT1_RS06690 | Not Available | Negative | 1214818 - 1215135 | 10665.5 |
| atp-binding protein | YT1_RS06695 | Not Available | Positive | 1215331 - 1217712 | 84331.2 |
| phosphoribosylformylglycinamidine synthase subunit purs | YT1_RS06700 | Not Available | Positive | 1217827 - 1218072 | 8679.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


