Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyl hydroperoxide reductase subunit c | YT1_RS06505 | Not Available | Negative | 1177920 - 1178483 | 20708.4 |
| nitroreductase/quinone reductase family protein | YT1_RS06510 | Not Available | Negative | 1178677 - 1179999 | 47648.9 |
| mut7-c rnase domain-containing protein | YT1_RS06515 | Not Available | Positive | 1180307 - 1181053 | 28450.4 |
| gaf and antar domain-containing protein | YT1_RS06520 | Not Available | Negative | 1181059 - 1181763 | 25409.4 |
| nad(+) synthase | YT1_RS06525 | Not Available | Positive | 1181954 - 1184095 | 78176.0 |
| maly/patb family protein | YT1_RS06530 | Not Available | Negative | 1184066 - 1185343 | 46611.6 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | YT1_RS06535 | Not Available | Negative | 1185507 - 1186100 | 20670.4 |
| llm class f420-dependent oxidoreductase | YT1_RS06540 | Not Available | Positive | 1186427 - 1187404 | 35541.9 |
| hypothetical protein | YT1_RS06545 | Not Available | Positive | 1187530 - 1187865 | 12363.7 |
| hypothetical protein | YT1_RS06550 | Not Available | Negative | 1187884 - 1188132 | 8242.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


