Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/isomerase family protein | YT1_RS06250 | Not Available | Positive | 1121731 - 1122582 | 30451.8 |
| phosphotransferase family protein | YT1_RS06255 | Not Available | Positive | 1122664 - 1123698 | 36789.7 |
| paax family transcriptional regulator c-terminal domain-containing protein | YT1_RS06260 | Not Available | Negative | 1123749 - 1124594 | 31113.0 |
| caib/baif coa transferase family protein | YT1_RS06265 | Not Available | Negative | 1124677 - 1125786 | 39360.8 |
| 2-hydroxyacyl-coa dehydratase subunit d | YT1_RS06270 | Not Available | Positive | 1125945 - 1127093 | 42782.1 |
| 2-hydroxyacyl-coa dehydratase subunit d | YT1_RS06275 | Not Available | Positive | 1127125 - 1128465 | 50353.5 |
| acyl-coa dehydratase activase | YT1_RS06280 | Not Available | Positive | 1128497 - 1129450 | 32756.2 |
| sdr family nad(p)-dependent oxidoreductase | YT1_RS06285 | Not Available | Positive | 1129450 - 1130250 | 27793.7 |
| amp-binding protein | YT1_RS06290 | Not Available | Positive | 1130485 - 1132143 | 60198.0 |
| acyl-coa dehydrogenase family protein | YT1_RS06295 | Not Available | Positive | 1132174 - 1132797 | 22697.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


