Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | YT1_RS06200 | Not Available | Positive | 1111854 - 1112603 | 25071.9 |
| thiolase family protein | YT1_RS06205 | Not Available | Positive | 1112603 - 1113796 | 42774.0 |
| acetyl-coa hydrolase/transferase family protein | YT1_RS06210 | Not Available | Positive | 1113796 - 1115034 | 43770.3 |
| hydroxymethylglutaryl-coa lyase | YT1_RS06215 | Not Available | Positive | 1115065 - 1115988 | 32925.3 |
| sdr family nad(p)-dependent oxidoreductase | YT1_RS06220 | Not Available | Positive | 1116044 - 1116802 | 26028.0 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | YT1_RS06225 | Not Available | Positive | 1116914 - 1117771 | 31325.4 |
| enoyl-coa hydratase/isomerase family protein | YT1_RS06230 | Not Available | Positive | 1117837 - 1118622 | 26921.3 |
| eama family transporter | YT1_RS06235 | Not Available | Positive | 1118628 - 1119578 | 32952.2 |
| caib/baif coa transferase family protein | YT1_RS06240 | Not Available | Positive | 1119665 - 1120855 | 42131.9 |
| enoyl-coa hydratase/isomerase family protein | YT1_RS06245 | Not Available | Positive | 1120916 - 1121725 | 28562.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


