Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr c-terminal-related transcriptional regulator | YT1_RS06150 | Not Available | Negative | 1099238 - 1100368 | 41009.9 |
| enoyl-coa hydratase/isomerase family protein | YT1_RS06155 | Not Available | Positive | 1100615 - 1101394 | 28256.1 |
| amp-binding protein | YT1_RS06160 | Not Available | Positive | 1101771 - 1103474 | 61366.0 |
| maoc family dehydratase | YT1_RS06165 | Not Available | Negative | 1104492 - 1104908 | 14162.1 |
| maoc family dehydratase n-terminal domain-containing protein | YT1_RS06170 | Not Available | Negative | 1104905 - 1105357 | 16797.8 |
| acyl-coa dehydrogenase family protein | YT1_RS06175 | Not Available | Positive | 1105423 - 1106598 | 43177.5 |
| amp-binding protein | YT1_RS06180 | Not Available | Positive | 1106601 - 1108559 | 69780.8 |
| fadr/gntr family transcriptional regulator | YT1_RS06185 | Not Available | Negative | 1108654 - 1109373 | 26584.8 |
| acyl-coa dehydrogenase family protein | YT1_RS06190 | Not Available | Positive | 1109538 - 1110614 | 38072.1 |
| acyl-coa dehydrogenase family protein | YT1_RS06195 | Not Available | Positive | 1110688 - 1111854 | 43024.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


