Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldolase | YT1_RS06045 | Not Available | Negative | 1071813 - 1072601 | 28518.2 |
| helix-turn-helix domain-containing protein | YT1_RS06050 | Not Available | Positive | 1072759 - 1073367 | 21667.5 |
| lyse family translocator | YT1_RS06055 | Not Available | Negative | 1073704 - 1074324 | 21028.0 |
| abc transporter substrate-binding protein | YT1_RS06060 | Not Available | Positive | 1074695 - 1075711 | 35676.6 |
| non-ribosomal peptide synthetase | YT1_RS06065 | Not Available | Positive | 1075788 - 1085174 | 331303.0 |
| phosphopantetheine-binding protein | YT1_RS06070 | Not Available | Positive | 1085179 - 1085418 | 8773.39 |
| enterobactin transporter ents | YT1_RS06075 | Not Available | Positive | 1085426 - 1086676 | 42259.1 |
| dihydrofolate reductase family protein | YT1_RS06080 | Not Available | Positive | 1086783 - 1087346 | 20550.3 |
| hypothetical protein | YT1_RS06085 | Not Available | Positive | 1087416 - 1087625 | 7271.03 |
| class i sam-dependent methyltransferase | YT1_RS06090 | Not Available | Positive | 1087622 - 1088275 | 23516.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


