Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2og-fe(ii) oxygenase | YT1_RS05995 | Not Available | Negative | 1054562 - 1055284 | 26944.9 |
| marr family winged helix-turn-helix transcriptional regulator | YT1_RS06000 | Not Available | Negative | 1055433 - 1055870 | 16264.6 |
| abc transporter atp-binding protein | YT1_RS06005 | Not Available | Positive | 1055947 - 1057782 | 65785.7 |
| isochorismatase family protein | YT1_RS06010 | Not Available | Negative | 1057790 - 1058443 | 23933.4 |
| (2,3-dihydroxybenzoyl)adenylate synthase | YT1_RS06015 | Not Available | Negative | 1058472 - 1060121 | 58880.1 |
| 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | YT1_RS06020 | Not Available | Negative | 1060137 - 1060907 | 26244.5 |
| isochorismate synthase menf | YT1_RS06025 | Not Available | Negative | 1060904 - 1062094 | 41111.7 |
| non-ribosomal peptide synthetase | YT1_RS06030 | Not Available | Positive | 1062270 - 1070006 | 274586.0 |
| gnat family n-acetyltransferase | YT1_RS06035 | Not Available | Negative | 1070259 - 1070723 | 17559.6 |
| dihydrodipicolinate synthase family protein | YT1_RS06040 | Not Available | Negative | 1070889 - 1071773 | 31932.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


