Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS01345 | Not Available | Positive | 63620 - 63976 | 12974.8 |
| hypothetical protein | YT1_RS27050 | Not Available | Negative | 63979 - 64134 | 5038.23 |
| ytxh domain-containing protein | YT1_RS01350 | Not Available | Negative | 64282 - 64626 | 11808.1 |
| histidine phosphatase family protein | YT1_RS01355 | Not Available | Negative | 64809 - 65408 | 22054.4 |
| helix-turn-helix transcriptional regulator | YT1_RS01360 | Not Available | Negative | 65478 - 68717 | 117998.0 |
| helix-turn-helix transcriptional regulator | YT1_RS01365 | Not Available | Negative | 68946 - 69625 | 24153.6 |
| sensor histidine kinase | YT1_RS01370 | Not Available | Negative | 69622 - 72156 | 89728.7 |
| potassium-transporting atpase subunit c | YT1_RS01375 | Not Available | Negative | 72164 - 72823 | 22179.5 |
| potassium-transporting atpase subunit kdpb | YT1_RS01380 | Not Available | Negative | 72829 - 74886 | 71003.2 |
| potassium-transporting atpase subunit kdpa | YT1_RS01385 | Not Available | Negative | 74916 - 76616 | 58252.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


