Pseudosulfitobacter pseudonitzschiae strain SMR1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pseudosulfitobacter

Description

Pseudosulfitobacter pseudonitzschiae strain SMR1 is characterized by having six replicons, indicating a complex genomic architecture. This strain is associated with the accession numbers NZ_CP022415.1, NZ_CP022416.1, NZ_CP022418.1, NZ_CP022419.1, NZ_CP022420.1, and NZ_CP022422.1, which provide a basis for its genomic analysis and taxonomic classification. The presence of multiple replicons in P. pseudonitzschiae strain SMR1 suggests a potential for genetic diversity and adaptability. This trait may enable the organism to thrive in varying environmental conditions, which is particularly relevant given its ecological context. The strain is likely to inhabit marine environments due to its classification within the Pseudosulfitobacter genus, which is typically found in such habitats. The genetic structure of P. pseudonitzschiae strain SMR1, as indicated by its six replicons, could play a role in its metabolic capabilities, including its interactions with other microorganisms in the marine ecosystem. Understanding the genomic features of this strain may provide insights into its ecological functions, such as nutrient cycling and its potential contributions to the marine microbiome. Overall, the genomic complexity of Pseudosulfitobacter pseudonitzschiae strain SMR1 highlights its potential ecological significance, particularly in marine environments where diverse microbial communities exist. The strain's adaptation mechanisms, reflected in its multiple replicons, may influence its interactions within these communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPseudosulfitobacter
SpeciesPseudosulfitobacter pseudonitzschiae
Strainstrain SMR1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudosulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-3,

Gene Summary

Adenine Count

59130 bp

Thymine Count

59232 bp

Guanine Count

83673 bp

Cytosine Count

82742 bp

Genome Length

284777 bp

Protein-coding Genes

281 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinSULPSESMR1_RS07195Not AvailableNegative1486309 - 148738839061.0
marr family winged helix-turn-helix transcriptional regulatorSULPSESMR1_RS07200Not AvailableNegative1487722 - 148820418380.3
trap transporter large permeaseSULPSESMR1_RS07205Not AvailableNegative1488206 - 148949845290.5
trap transporter small permeaseSULPSESMR1_RS07210Not AvailableNegative1489495 - 149004920043.9
trap transporter substrate-binding proteinSULPSESMR1_RS07215Not AvailableNegative1490126 - 149114536951.6
chemotaxis protein chedSULPSESMR1_RS07220Not AvailablePositive1491434 - 149194918456.2
hypothetical proteinSULPSESMR1_RS07225Not AvailableNegative1492396 - 149272212034.3
response regulatorSULPSESMR1_RS07230Not AvailableNegative1492731 - 149311714409.6
cher family methyltransferaseSULPSESMR1_RS07235Not AvailableNegative1493104 - 149401534277.2
chemotaxis protein chewSULPSESMR1_RS07240Not AvailableNegative1494012 - 149447016615.2

Displaying genes 2421 – 2430 of 4675 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.