Pseudosulfitobacter pseudonitzschiae strain SMR1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pseudosulfitobacter

Description

Pseudosulfitobacter pseudonitzschiae strain SMR1 is characterized by having six replicons, indicating a complex genomic architecture. This strain is associated with the accession numbers NZ_CP022415.1, NZ_CP022416.1, NZ_CP022418.1, NZ_CP022419.1, NZ_CP022420.1, and NZ_CP022422.1, which provide a basis for its genomic analysis and taxonomic classification. The presence of multiple replicons in P. pseudonitzschiae strain SMR1 suggests a potential for genetic diversity and adaptability. This trait may enable the organism to thrive in varying environmental conditions, which is particularly relevant given its ecological context. The strain is likely to inhabit marine environments due to its classification within the Pseudosulfitobacter genus, which is typically found in such habitats. The genetic structure of P. pseudonitzschiae strain SMR1, as indicated by its six replicons, could play a role in its metabolic capabilities, including its interactions with other microorganisms in the marine ecosystem. Understanding the genomic features of this strain may provide insights into its ecological functions, such as nutrient cycling and its potential contributions to the marine microbiome. Overall, the genomic complexity of Pseudosulfitobacter pseudonitzschiae strain SMR1 highlights its potential ecological significance, particularly in marine environments where diverse microbial communities exist. The strain's adaptation mechanisms, reflected in its multiple replicons, may influence its interactions within these communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPseudosulfitobacter
SpeciesPseudosulfitobacter pseudonitzschiae
Strainstrain SMR1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudosulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-5,

Gene Summary

Adenine Count

28028 bp

Thymine Count

28361 bp

Guanine Count

43300 bp

Cytosine Count

42418 bp

Genome Length

142107 bp

Protein-coding Genes

155 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amp-binding proteinSULPSESMR1_RS20890Not AvailablePositive154 - 191164299.7
smp-30/gluconolactonase/lre family proteinSULPSESMR1_RS25100Not AvailablePositive1921 - 20655640.84
abrb family transcriptional regulatorSULPSESMR1_RS20895Not AvailableNegative2182 - 326737775.2
abc transporter substrate-binding proteinSULPSESMR1_RS20900Not AvailablePositive3593 - 516157230.0
abc transporter permeaseSULPSESMR1_RS20905Not AvailablePositive5205 - 615834918.9
abc transporter permeaseSULPSESMR1_RS20910Not AvailablePositive6151 - 706531826.5
abc transporter atp-binding proteinSULPSESMR1_RS20915Not AvailablePositive7078 - 805835314.2
abc transporter atp-binding proteinSULPSESMR1_RS20920Not AvailablePositive8055 - 908336664.6
alpha/beta fold hydrolaseSULPSESMR1_RS20925Not AvailableNegative9093 - 998330999.2
flavin-containing monooxygenaseSULPSESMR1_RS20930Not AvailablePositive10132 - 1164956384.3

Displaying genes 1 – 10 of 4675 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.