Laribacter hongkongensis strain HLGZ1

BacilliNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Aquaspirillaceae

Genus

Laribacter

Description

Laribacter hongkongensis strain HLGZ1 is a Gram-negative, anaerobic bacterium characterized by its bacilli shape. One of the notable features of this strain is its lack of mobility, which indicates that it does not possess the ability to move independently. Despite having flagella, the strain does not utilize them for motility. This strain is classified as mesophilic, meaning it thrives in moderate temperature ranges, although specific temperature values are not provided. Additionally, it has a single replicon, which suggests a simplified genetic structure compared to organisms with multiple replicons. Laribacter hongkongensis strain HLGZ1 is described as free-living, indicating that it does not rely on a host organism for survival and can exist independently in its environment. The strain is documented under the accession number NZ_CP022115.1, providing a reference point for further studies and analysis. From a biological and ecological perspective, the traits of Laribacter hongkongensis strain HLGZ1 suggest a potential role in anaerobic environments where organic matter decomposition occurs. Its free-living nature may also indicate its involvement in nutrient cycling, particularly in habitats where mesophilic conditions prevail. Understanding the ecological functions of such strains can provide insights into their contributions to microbial communities and their roles in biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyAquaspirillaceae
GenusLaribacter
SpeciesLaribacter hongkongensis
Strainstrain HLGZ1

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Laribacter hongkongensis strain HLGZ1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Laribacter hongkongensis strain HLGZ1 chromosome, complete genome.

Gene Summary

Adenine Count

644255 bp

Thymine Count

646995 bp

Guanine Count

1067195 bp

Cytosine Count

1065827 bp

Genome Length

3424272 bp

Protein-coding Genes

3036 genes

Non-Coding Genes

362 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phospho-n-acetylmuramoyl-pentapeptide- transferaseLHGZ1_RS15360Not AvailableNegative3178642 - 317972739103.0
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseLHGZ1_RS15365Not AvailableNegative3179785 - 318114346547.4
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseLHGZ1_RS15370Not AvailableNegative3181137 - 318261252624.7
peptidoglycan d,d-transpeptidase ftsi family proteinLHGZ1_RS15375Not AvailableNegative3182609 - 318438464802.7
cell division protein ftslLHGZ1_RS15380Not AvailableNegative3184384 - 318465910546.0
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhLHGZ1_RS15385Not AvailableNegative3184656 - 318560934818.8
division/cell wall cluster transcriptional repressor mrazLHGZ1_RS15390Not AvailableNegative3185606 - 318604015688.4
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatbLHGZ1_RS15395Not AvailableNegative3186285 - 318771551513.2
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataLHGZ1_RS15400Not AvailableNegative3187798 - 318924951124.9
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcLHGZ1_RS15405Not AvailableNegative3189295 - 318958210287.3

Displaying genes 3191 – 3200 of 3398 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

80 records
Metabolite IDMetabolite nameStructureCAS number
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da
BASm0017399CDP-DG(18:0/18:1(9Z))C48H87N3O15P2Chemical structure of CDP-DG(18:0/18:1(9Z))NULL
Average1008.178Da
Monoisotopic1007.561243109Da

Displaying 1–10 of 80 metabolites

Health Effects

No health effects information available for this bacterium.