Laribacter hongkongensis strain HLGZ1

BacilliNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Aquaspirillaceae

Genus

Laribacter

Description

Laribacter hongkongensis strain HLGZ1 is a Gram-negative, anaerobic bacterium characterized by its bacilli shape. One of the notable features of this strain is its lack of mobility, which indicates that it does not possess the ability to move independently. Despite having flagella, the strain does not utilize them for motility. This strain is classified as mesophilic, meaning it thrives in moderate temperature ranges, although specific temperature values are not provided. Additionally, it has a single replicon, which suggests a simplified genetic structure compared to organisms with multiple replicons. Laribacter hongkongensis strain HLGZ1 is described as free-living, indicating that it does not rely on a host organism for survival and can exist independently in its environment. The strain is documented under the accession number NZ_CP022115.1, providing a reference point for further studies and analysis. From a biological and ecological perspective, the traits of Laribacter hongkongensis strain HLGZ1 suggest a potential role in anaerobic environments where organic matter decomposition occurs. Its free-living nature may also indicate its involvement in nutrient cycling, particularly in habitats where mesophilic conditions prevail. Understanding the ecological functions of such strains can provide insights into their contributions to microbial communities and their roles in biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyAquaspirillaceae
GenusLaribacter
SpeciesLaribacter hongkongensis
Strainstrain HLGZ1

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Laribacter hongkongensis strain HLGZ1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Laribacter hongkongensis strain HLGZ1 chromosome, complete genome.

Gene Summary

Adenine Count

644255 bp

Thymine Count

646995 bp

Guanine Count

1067195 bp

Cytosine Count

1065827 bp

Genome Length

3424272 bp

Protein-coding Genes

3036 genes

Non-Coding Genes

362 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron-sulfur cluster assembly protein iscaLHGZ1_RS14385Not AvailableNegative2971915 - 297223811555.6
fe-s cluster assembly scaffold iscuLHGZ1_RS14390Not AvailableNegative2972249 - 297263813823.5
iscs subfamily cysteine desulfuraseLHGZ1_RS14395Not AvailableNegative2972699 - 297391645356.2
fe-s cluster assembly transcriptional regulator iscrLHGZ1_RS14400Not AvailableNegative2973945 - 297442417365.9
s-methyl-5'-thioinosine phosphorylaseLHGZ1_RS14405Not AvailableNegative2974547 - 297531126680.0
duf3149 domain-containing proteinLHGZ1_RS17095Not AvailableNegative2975370 - 29755195438.89
fkbp-type peptidyl-prolyl cis-trans isomeraseLHGZ1_RS14410Not AvailableNegative2975673 - 297600812337.8
50s ribosomal protein l11 methyltransferaseLHGZ1_RS14415Not AvailableNegative2976028 - 297721242467.9
lysr family transcriptional regulatorLHGZ1_RS14425Not AvailableNegative2977578 - 297841129541.1
sdr family oxidoreductaseLHGZ1_RS14430Not AvailablePositive2978517 - 297923925730.2

Displaying genes 2991 – 3000 of 3398 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

80 records
Metabolite IDMetabolite nameStructureCAS number
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da
BASm0017399CDP-DG(18:0/18:1(9Z))C48H87N3O15P2Chemical structure of CDP-DG(18:0/18:1(9Z))NULL
Average1008.178Da
Monoisotopic1007.561243109Da

Displaying 1–10 of 80 metabolites

Health Effects

No health effects information available for this bacterium.