Rhodococcus oxybenzonivorans strain S2-17

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus oxybenzonivorans strain S2-17 is a notable bacterium characterized by the presence of flagella, which suggests it has motility capabilities. This feature may play a role in its ecological adaptation and interaction within diverse environments. The strain is distinguished by its genetic makeup, containing two replicons, which can influence its genetic diversity and adaptability. The strain is documented with accession numbers NZ_CP021355.1 and NZ_CP021356.1, indicating its genomic sequences are available for further research and analysis. These sequences can provide insight into the metabolic pathways and potential applications of R. oxybenzonivorans, particularly in bioremediation processes, given the genus's known ability to degrade various environmental pollutants. In summary, the flagella presence and dual replicon structure of R. oxybenzonivorans strain S2-17 may contribute to its ecological versatility and potential in biotechnological applications. Understanding these traits enhances our knowledge of microbial behavior in natural and contaminated environments, underscoring the importance of such organisms in ecological balance and remediation efforts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus oxybenzonivorans
Strainstrain S2-17

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus oxybenzonivorans strain S2-17


Gene Summary

Adenine Count

175001 bp

Thymine Count

174570 bp

Guanine Count

318870 bp

Cytosine Count

315760 bp

Genome Length

984201 bp

Protein-coding Genes

972 genes

Non-Coding Genes

2 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is21 family transposaseCBI38_RS30685Not AvailableNegative1 - 144950725.4
gntr family transcriptional regulatorCBI38_RS30690Not AvailablePositive1502 - 223326417.7
is21 family transposaseCBI38_RS30695Not AvailableNegative2273 - 292823056.7
hypothetical proteinCBI38_RS30700Not AvailableNegative3062 - 358617795.3
hypothetical proteinCBI38_RS30705Not AvailableNegative3639 - 428621705.3
hypothetical proteinCBI38_RS30710Not AvailableNegative4283 - 499024908.7
hypothetical proteinCBI38_RS30715Not AvailableNegative5039 - 557218579.6
hypothetical proteinCBI38_RS30720Not AvailableNegative5583 - 623622641.7
hypothetical proteinCBI38_RS30725Not AvailableNegative6233 - 668815955.7
scp2 sterol-binding domain-containing proteinCBI38_RS30730Not AvailableNegative6795 - 720815107.8

Displaying genes 1 – 10 of 1252 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

133 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm00004573,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dioneC19H24O4Chemical structure of 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dioneNot available
Average316.3915Da
Monoisotopic316.1674593Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da
BASm00008001,8-diazacyclotetradecane-2,9-dioneC12H22N2O2Chemical structure of 1,8-diazacyclotetradecane-2,9-dioneNot available
Average226.32Da
Monoisotopic226.168127956Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da

Displaying 1–10 of 133 metabolites

Health Effects

No health effects information available for this bacterium.