Citrobacter braakii strain SCC4

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter braakii strain SCC4 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella. This motility feature may enhance its ability to navigate various environments, potentially impacting its ecological interactions. The strain contains two replicons, indicating a complex genomic structure that may contribute to its adaptability. Citrobacter braakii has been identified in diverse hosts, including Homo sapiens (humans), Oncorhynchus mykiss (rainbow trout), Ictalurus punctatus (channel catfish), Xenopus laevis (African clawed frog), Kurixalus bisacculus (a species of tree frog), and Oophaga histrionica (a species of poison dart frog). This broad host range suggests that C. braakii may play various roles in different ecosystems, possibly including pathogenic, symbiotic, or commensal interactions. The strain is cataloged under the accessions NZ_CP021078.1 and MTCP00000000.1, which provide valuable genomic information for further research. Understanding the genetic makeup and ecological roles of Citrobacter braakii strain SCC4 can provide insights into its interactions with both aquatic and terrestrial hosts, as well as its potential implications in health and disease contexts. This knowledge may be important for microbiological studies and environmental monitoring, particularly in relation to its presence in diverse animal species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter braakii
Strainstrain SCC4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter braakii strain SCC4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens, Oncorhynchus mykiss, Ictalurus punctatus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter braakii strain SCC4 plasmid pSCC4, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

57 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytosine permeaseBWD41_19775Not AvailableNegative4017229 - 401847943380.6
glutamate synthase small subunitBWD41_19785Not AvailableNegative4018664 - 402008252160.4
glutamate synthase large subunitBWD41_19790Not AvailableNegative4020095 - 4024591164599.0
hypothetical proteinBWD41_19795Not AvailablePositive4024497 - 402485613555.2
tigr01212 family radical sam proteinBWD41_19800Not AvailablePositive4025105 - 402616939392.5
hybrid sensor histidine kinase/response regulatorBWD41_19805Not AvailablePositive4026337 - 402867387926.1
glutamine amidotransferaseBWD41_19810Not AvailablePositive4028903 - 402955622905.7
monofunctional biosynthetic peptidoglycan transglycosylaseBWD41_19815Not AvailablePositive4029553 - 403027226843.6
hpr family phosphocarrier proteinBWD41_19820Not AvailableNegative4030359 - 40306319794.76
rnase adaptor protein rapzBWD41_19825Not AvailableNegative4030628 - 403148232538.2

Displaying genes 3931 – 3940 of 5405 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.