Citrobacter braakii strain SCC4

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter braakii strain SCC4 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella. This motility feature may enhance its ability to navigate various environments, potentially impacting its ecological interactions. The strain contains two replicons, indicating a complex genomic structure that may contribute to its adaptability. Citrobacter braakii has been identified in diverse hosts, including Homo sapiens (humans), Oncorhynchus mykiss (rainbow trout), Ictalurus punctatus (channel catfish), Xenopus laevis (African clawed frog), Kurixalus bisacculus (a species of tree frog), and Oophaga histrionica (a species of poison dart frog). This broad host range suggests that C. braakii may play various roles in different ecosystems, possibly including pathogenic, symbiotic, or commensal interactions. The strain is cataloged under the accessions NZ_CP021078.1 and MTCP00000000.1, which provide valuable genomic information for further research. Understanding the genetic makeup and ecological roles of Citrobacter braakii strain SCC4 can provide insights into its interactions with both aquatic and terrestrial hosts, as well as its potential implications in health and disease contexts. This knowledge may be important for microbiological studies and environmental monitoring, particularly in relation to its presence in diverse animal species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter braakii
Strainstrain SCC4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter braakii strain SCC4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens, Oncorhynchus mykiss, Ictalurus punctatus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter braakii strain SCC4 plasmid pSCC4, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

57 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exodeoxyribonuclease vii large subunitBWD41_08920Not AvailableNegative1824105 - 182547852058.5
imp dehydrogenaseBWD41_08925Not AvailablePositive1825639 - 182710551960.5
gmp synthetaseBWD41_08930Not AvailablePositive1827169 - 182874658820.8
duf2633 domain-containing proteinBWD41_08935Not AvailableNegative1829302 - 18295057956.71
sensor domain-containing phosphodiesteraseBWD41_08940Not AvailablePositive1829856 - 183212686595.9
exopolyphosphataseBWD41_08945Not AvailableNegative1832106 - 183364758081.0
rna degradosome polyphosphate kinaseBWD41_08950Not AvailableNegative1833652 - 183571880468.0
phosphoribosylglycinamide formyltransferaseBWD41_08955Not AvailableNegative1835933 - 183657423516.7
phosphoribosylformylglycinamidine cyclo-ligaseBWD41_08960Not AvailableNegative1836571 - 183760836863.2
6-phospho-beta-glucosidaseBWD41_08965Not AvailablePositive1837904 - 183933454388.2

Displaying genes 1971 – 1980 of 5405 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.