Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella khirikhana |
| Strain | strain TH2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella khirikhana strain TH2012 chromosome, complete genome.
Gene Summary
Adenine Count
1086109 bp
Thymine Count
1083706 bp
Guanine Count
1321867 bp
Cytosine Count
1316947 bp
Genome Length
4808629 bp
Protein-coding Genes
4048 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(13) synthase trud | STH12_RS02870 | Not Available | Positive | 672395 - 673486 | 40512.2 |
| 5'/3'-nucleotidase sure | STH12_RS02875 | Not Available | Positive | 673467 - 674213 | 26154.2 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | STH12_RS02880 | Not Available | Positive | 674210 - 674845 | 22883.9 |
| peptidoglycan dd-metalloendopeptidase family protein | STH12_RS02885 | Not Available | Positive | 674868 - 675758 | 31813.3 |
| rna polymerase sigma factor rpos | STH12_RS02890 | Not Available | Positive | 675842 - 676825 | 37289.4 |
| dna mismatch repair protein muts | STH12_RS02895 | Not Available | Negative | 676924 - 679491 | 95515.0 |
| recombinase reca | STH12_RS02900 | Not Available | Positive | 679767 - 680831 | 37843.5 |
| regulatory protein recx | STH12_RS02905 | Not Available | Positive | 680843 - 681280 | 16176.2 |
| alanine--trna ligase | STH12_RS02910 | Not Available | Positive | 681509 - 684130 | 94701.8 |
| aspartate kinase | STH12_RS02915 | Not Available | Positive | 684164 - 685375 | 42520.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

