Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella khirikhana |
| Strain | strain TH2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella khirikhana strain TH2012 chromosome, complete genome.
Gene Summary
Adenine Count
1086109 bp
Thymine Count
1083706 bp
Guanine Count
1321867 bp
Cytosine Count
1316947 bp
Genome Length
4808629 bp
Protein-coding Genes
4048 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | STH12_RS18840 | Not Available | Negative | 4284257 - 4285147 | 31289.4 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | STH12_RS18845 | Not Available | Negative | 4285325 - 4286140 | 29759.4 |
| hypothetical protein | STH12_RS18850 | Not Available | Negative | 4286186 - 4286629 | 16317.1 |
| gtp 3',8-cyclase moaa | STH12_RS18855 | Not Available | Negative | 4286704 - 4287687 | 36489.3 |
| bifunctional molybdopterin-guanine dinucleotide biosynthesis adaptor protein mobb/molybdopterin molybdotransferase moea | STH12_RS18860 | Not Available | Negative | 4287697 - 4289496 | 64112.2 |
| molybdenum cofactor guanylyltransferase moba | STH12_RS18865 | Not Available | Negative | 4289513 - 4290103 | 21426.9 |
| energy-coupling factor abc transporter atp-binding protein | STH12_RS18870 | Not Available | Negative | 4290087 - 4290785 | 25285.6 |
| abc transporter permease | STH12_RS18875 | Not Available | Negative | 4290785 - 4291492 | 25593.3 |
| substrate-binding domain-containing protein | STH12_RS18880 | Not Available | Negative | 4291489 - 4292301 | 29030.7 |
| sigma-54-dependent transcriptional regulator | STH12_RS18885 | Not Available | Positive | 4292575 - 4293960 | 51526.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

