Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella khirikhana |
| Strain | strain TH2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella khirikhana strain TH2012 chromosome, complete genome.
Gene Summary
Adenine Count
1086109 bp
Thymine Count
1083706 bp
Guanine Count
1321867 bp
Cytosine Count
1316947 bp
Genome Length
4808629 bp
Protein-coding Genes
4048 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome silencing factor | STH12_RS11885 | Not Available | Positive | 2723632 - 2723958 | 12237.6 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | STH12_RS11890 | Not Available | Positive | 2723958 - 2724428 | 17346.1 |
| penicillin-binding protein 2 | STH12_RS11895 | Not Available | Positive | 2724466 - 2726322 | 69804.4 |
| rod shape-determining protein roda | STH12_RS11900 | Not Available | Positive | 2726331 - 2727437 | 41029.9 |
| lytic murein transglycosylase b | STH12_RS11905 | Not Available | Positive | 2727447 - 2728442 | 37034.1 |
| septal ring lytic transglycosylase rlpa family protein | STH12_RS11910 | Not Available | Positive | 2728423 - 2729268 | 30926.6 |
| serine hydrolase | STH12_RS11915 | Not Available | Positive | 2729368 - 2730543 | 43317.6 |
| duf493 family protein ybed | STH12_RS11920 | Not Available | Positive | 2730654 - 2730920 | 9555.34 |
| lipoyl(octanoyl) transferase lipb | STH12_RS11925 | Not Available | Positive | 2731017 - 2731667 | 24017.7 |
| lipoyl synthase | STH12_RS11930 | Not Available | Positive | 2731669 - 2732634 | 36333.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

