Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella khirikhana |
| Strain | strain TH2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086109 bp
Thymine Count
1083706 bp
Guanine Count
1321867 bp
Cytosine Count
1316947 bp
Genome Length
4808629 bp
Protein-coding Genes
4048 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative ci repressor | STH12_RS21540 | Not Available | - | 1144234 - 1145007 | 28927.2 |
| Dna binding protein ner | STH12_RS04865 | Not Available | + | 1145174 - 1145395 | 8010.58 |
| Transposase | STH12_RS04870 | Not Available | + | 1145407 - 1147062 | 62083.7 |
| Phage tail tape measure protein | STH12_RS04875 | Not Available | - | 1147295 - 1149046 | 61936.9 |
| Putative major capsid protein | STH12_RS04880 | Not Available | - | 1149096 - 1149998 | 33513.4 |
| I protein | STH12_RS04885 | Not Available | - | 1150001 - 1150816 | 30106.7 |
| hypothetical protein | STH12_RS04890 | Not Available | - | 1150928 - 1151299 | 13336.8 |
| Hypothetical protein | STH12_RS04895 | Not Available | - | 1151300 - 1151683 | 14378.4 |
| hypothetical protein | STH12_RS04900 | Not Available | - | 1151696 - 1152154 | 17149.1 |
| hypothetical protein | STH12_RS04905 | Not Available | - | 1152299 - 1152625 | 12276.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
