Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CRE1540 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CRE1540 plasmid p1540-3, complete
Gene Summary
Adenine Count
29142 bp
Thymine Count
29860 bp
Guanine Count
28358 bp
Cytosine Count
28668 bp
Genome Length
116028 bp
Protein-coding Genes
20 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Toxin protein | BVL39_RS27265 | Not Available | Positive | 46950 - 47330 | 13589.1 |
| Pdca | BVL39_RS27270 | Not Available | Positive | 47335 - 47514 | 6776.63 |
| Hypothetical protein | BVL39_RS27275 | Not Available | Positive | 47542 - 48585 | 39831.0 |
| Late promoter-activating protein lpa | BVL39_RS27280 | Not Available | Positive | 48674 - 49126 | 18180.8 |
| Paca | BVL39_RS27285 | Not Available | Positive | 49213 - 50406 | 45189.3 |
| Pacb | BVL39_RS27290 | Not Available | Positive | 50406 - 51890 | 55607.6 |
| Repressor protein c1 | BVL39_RS27295 | Not Available | Negative | 51916 - 52767 | 32473.0 |
| C1 repressor inactivator | BVL39_RS27300 | Not Available | Negative | 52878 - 53087 | 7742.8 |
| Putative cre-associated regulatory protein | BVL39_RS27315 | Not Available | Positive | 53692 - 53913 | 8604.3 |
| Recombinase | BVL39_RS27320 | Not Available | Positive | 53921 - 54952 | 38589.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





