Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CRE1540 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CRE1540 plasmid p1540-3, complete
Gene Summary
Adenine Count
29142 bp
Thymine Count
29860 bp
Guanine Count
28358 bp
Cytosine Count
28668 bp
Genome Length
116028 bp
Protein-coding Genes
20 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| entry exclusion protein | BVL39_RS28650 | Not Available | Positive | 161655 - 162152 | 19076.2 |
| conjugal transfer complement resistance protein trat | BVL39_RS28655 | Not Available | Positive | 162184 - 162915 | 25932.2 |
| type iv conjugative transfer system coupling protein trad | BVL39_RS28660 | Not Available | Positive | 163168 - 165375 | 83653.0 |
| type ii toxin-antitoxin system trna(fmet)-specific endonuclease vapc | BVL39_RS28665 | Not Available | Negative | 165384 - 165782 | 14902.1 |
| toxin-antitoxin system antitoxin vapb | BVL39_RS28670 | Not Available | Negative | 165782 - 166009 | 8597.09 |
| conjugative transfer relaxase/helicase trai | BVL39_RS28675 | Not Available | Positive | 166091 - 171361 | 191995.0 |
| conjugal transfer pilus acetylase trax | BVL39_RS28680 | Not Available | Positive | 171381 - 172127 | 27759.0 |
| uils family quorum-quenching n-acyl-homoserine lactonase | BVL39_RS28685 | Not Available | Positive | 172186 - 173046 | 31736.2 |
| fertility inhibition protein fino | BVL39_RS28690 | Not Available | Positive | 173149 - 173709 | 21052.6 |
| anr family transcriptional regulator | BVL39_RS28695 | Not Available | Positive | 173845 - 174057 | 8272.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





