Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CRE1540 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CRE1540 plasmid p1540-3, complete
Gene Summary
Adenine Count
29142 bp
Thymine Count
29860 bp
Guanine Count
28358 bp
Cytosine Count
28668 bp
Genome Length
116028 bp
Protein-coding Genes
20 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lasso peptide biosynthesis b2 protein | BVL39_RS28395 | Not Available | Positive | 124121 - 124747 | 24569.7 |
| lasso peptide isopeptide bond-forming cyclase | BVL39_RS28400 | Not Available | Positive | 124750 - 126291 | 58710.4 |
| abc transporter atp-binding protein | BVL39_RS28405 | Not Available | Positive | 126294 - 128036 | 65418.6 |
| is3 family transposase | BVL39_RS28410 | Not Available | Negative | 128361 - 128849 | 18715.6 |
| is1-like element is1a family transposase | BVL39_RS28420 | Not Available | Positive | 128907 - 129604 | 26513.2 |
| plasmid-partitioning protein sopa | BVL39_RS28425 | Not Available | Positive | 129904 - 131070 | 43690.6 |
| parb/repb/spo0j family plasmid partition protein | BVL39_RS28430 | Not Available | Positive | 131070 - 132041 | 35388.3 |
| is3 family transposase | BVL39_RS29800 | Not Available | Positive | 132936 - 133105 | 6712.13 |
| hypothetical protein | BVL39_RS29355 | Not Available | Positive | 133102 - 133449 | 12301.4 |
| mobilome cxxcx(11)cxxc protein | BVL39_RS28440 | Not Available | Positive | 133518 - 134093 | 21676.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





