Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CRE1540 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CRE1540 plasmid p1540-3, complete
Gene Summary
Adenine Count
29142 bp
Thymine Count
29860 bp
Guanine Count
28358 bp
Cytosine Count
28668 bp
Genome Length
116028 bp
Protein-coding Genes
20 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Upfa | BVL39_RS27090 | Not Available | Negative | 18941 - 19333 | 14748.2 |
| Conserved protein of unknown function ppfa | BVL39_RS27095 | Not Available | Negative | 19511 - 19933 | 15745.8 |
| Hypothetical protein | BVL39_RS27100 | Not Available | Negative | 19973 - 20761 | 27130.8 |
| Conserved protein of unknown function uhr | BVL39_RS27110 | Not Available | Positive | 21224 - 21508 | 10749.0 |
| Recombination-associated protein rdgc | BVL39_RS27115 | Not Available | Positive | 21501 - 22406 | 33611.4 |
| Dmt | BVL39_RS27120 | Not Available | Positive | 22403 - 24667 | 83446.0 |
| Trna-asn; | Not Available | Not Available | Positive | 25340 - 25415 | Not Available |
| Trna-thr; | Not Available | Not Available | Positive | 25418 - 25493 | Not Available |
| Putative tellurite or colicin resistance protein | BVL39_RS27140 | Not Available | Positive | 26225 - 26650 | 15189.2 |
| Tcib | BVL39_RS29055 | Not Available | Positive | 26650 - 26814 | 5753.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





