Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CRE1540 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CRE1540 plasmid p1540-3, complete
Gene Summary
Adenine Count
29142 bp
Thymine Count
29860 bp
Guanine Count
28358 bp
Cytosine Count
28668 bp
Genome Length
116028 bp
Protein-coding Genes
20 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein | BVL39_RS29720 | Not Available | Negative | 53813 - 54103 | 10512.0 |
| lytic transglycosylase domain-containing protein | BVL39_RS25865 | Not Available | Negative | 54103 - 54687 | 21519.2 |
| hypothetical protein | BVL39_RS25870 | Not Available | Negative | 54708 - 55106 | 15333.6 |
| type iv pilus biogenesis protein pilm | BVL39_RS25875 | Not Available | Negative | 55225 - 55662 | 16451.9 |
| tcpq domain-containing protein | BVL39_RS25880 | Not Available | Negative | 55668 - 56903 | 45580.0 |
| trbm/kika/mpfk family conjugal transfer protein | BVL39_RS25885 | Not Available | Negative | 56906 - 57205 | 10501.8 |
| type ii toxin-antitoxin system rele family toxin | BVL39_RS25890 | Not Available | Negative | 57273 - 57554 | 10946.4 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | BVL39_RS25895 | Not Available | Negative | 57544 - 57795 | 9223.87 |
| hypothetical protein | BVL39_RS25900 | Not Available | Negative | 57895 - 58530 | 23048.6 |
| eexn family lipoprotein | BVL39_RS25905 | Not Available | Negative | 58603 - 58890 | 11019.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





