Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CRE1540 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CRE1540 plasmid p1540-3, complete
Gene Summary
Adenine Count
29142 bp
Thymine Count
29860 bp
Guanine Count
28358 bp
Cytosine Count
28668 bp
Genome Length
116028 bp
Protein-coding Genes
20 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BVL39_RS25755 | Not Available | Negative | 32674 - 33327 | 25045.7 |
| site-specific integrase | BVL39_RS25760 | Not Available | Negative | 33339 - 34463 | 43068.3 |
| hypothetical protein | BVL39_RS29035 | Not Available | Positive | 35091 - 35426 | 12500.1 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | BVL39_RS25770 | Not Available | Negative | 35436 - 36692 | 44988.1 |
| a24 family peptidase | BVL39_RS25775 | Not Available | Negative | 36705 - 37340 | 23733.0 |
| lytic transglycosylase domain-containing protein | BVL39_RS25780 | Not Available | Negative | 37344 - 37826 | 18159.2 |
| type 4 pilus major pilin | BVL39_RS25785 | Not Available | Negative | 37892 - 38449 | 19794.6 |
| type ii secretion system f family protein | BVL39_RS25790 | Not Available | Negative | 38494 - 39603 | 41831.3 |
| gspe/pule family protein | BVL39_RS25795 | Not Available | Negative | 39594 - 41132 | 57375.3 |
| type iv pilus biogenesis protein pilp | BVL39_RS25800 | Not Available | Negative | 41157 - 41651 | 17634.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





