Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CRE1540 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CRE1540 plasmid p1540-3, complete
Gene Summary
Adenine Count
29142 bp
Thymine Count
29860 bp
Guanine Count
28358 bp
Cytosine Count
28668 bp
Genome Length
116028 bp
Protein-coding Genes
20 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | BVL39_RS25645 | Not Available | Positive | 13083 - 13334 | 9405.28 |
| hypothetical protein | BVL39_RS25660 | Not Available | Positive | 13884 - 14162 | 10664.7 |
| thermonuclease family protein | BVL39_RS25665 | Not Available | Positive | 14582 - 14824 | 9306.07 |
| hypothetical protein | BVL39_RS29715 | Not Available | Negative | 14955 - 15398 | 16598.3 |
| type ii toxin-antitoxin system hica family toxin | BVL39_RS25675 | Not Available | Positive | 15695 - 15877 | 6648.32 |
| type ii toxin-antitoxin system hicb family antitoxin | BVL39_RS25680 | Not Available | Positive | 15902 - 16339 | 16115.9 |
| hypothetical protein | BVL39_RS25685 | Not Available | Negative | 16470 - 16796 | 12190.5 |
| hypothetical protein | BVL39_RS25690 | Not Available | Negative | 16816 - 17523 | 26847.0 |
| conjugal transfer protein tral | BVL39_RS25695 | Not Available | Negative | 17525 - 18277 | 28153.7 |
| hypothetical protein | BVL39_RS25700 | Not Available | Negative | 18295 - 18696 | 15430.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





