Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CRE1540 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CRE1540 plasmid p1540-3, complete
Gene Summary
Adenine Count
29142 bp
Thymine Count
29860 bp
Guanine Count
28358 bp
Cytosine Count
28668 bp
Genome Length
116028 bp
Protein-coding Genes
20 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Lydc | BVL39_RS27605 | Not Available | Negative | 102842 - 103123 | 10504.0 |
| Cin | BVL39_RS27610 | Not Available | Positive | 103251 - 103811 | 21231.9 |
| Tail fibrer protein gps | BVL39_RS27615 | Not Available | Positive | 103859 - 105094 | 43927.8 |
| Tail fiber assembly protein | BVL39_RS27620 | Not Available | Positive | 105097 - 105630 | 20758.5 |
| Tail fiber assembly | BVL39_RS27625 | Not Available | Negative | 105659 - 106186 | 20323.6 |
| Tail fibrer protein gps | BVL39_RS27630 | Not Available | Negative | 106190 - 109030 | 100078.0 |
| Tail fiber protein r | BVL39_RS27635 | Not Available | Negative | 109042 - 109476 | 15989.1 |
| Putative tail tube structural protein gp16 | BVL39_RS27640 | Not Available | Negative | 109555 - 110391 | 31311.4 |
| Putative baseplate structural protein | BVL39_RS27645 | Not Available | Negative | 110391 - 111824 | 53608.4 |
| Pmga | BVL39_RS27650 | Not Available | Negative | 111821 - 112177 | 13240.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





