Xanthomonas hortorum pv. gardneri strain ICMP 7383

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas hortorum pv. gardneri strain ICMP 7383 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility and environmental adaptability. This strain is notable for having two replicons, indicating a complex genetic structure that may support its pathogenicity and ecological interactions. The strain is cataloged under the accessions NZ_CP018733.1 and NZ_CP018734.1, which provide a basis for its genomic study and classification within the Xanthomonas genus. The presence of two replicons suggests a potential for diverse genetic traits, which can include factors related to virulence, resistance to environmental stressors, and metabolic versatility. In terms of its ecological role, Xanthomonas hortorum pv. gardneri is known to interact with plant hosts, often leading to diseases that can affect agricultural productivity. Understanding the genetic makeup of this strain, particularly through its replicons, can provide insights into its mechanisms of infection and survival strategies in various environments. This knowledge is essential for developing effective management strategies against the diseases it may cause in crops, emphasizing the importance of microbial research in agriculture and plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas hortorum
Strainpv. gardneri strain ICMP 7383

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas hortorum pv. gardneri strain ICMP 7383
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas hortorum pv. gardneri strain ICMP 7383


Gene Summary

Adenine Count

12163 bp

Thymine Count

12535 bp

Guanine Count

18636 bp

Cytosine Count

18506 bp

Genome Length

61840 bp

Protein-coding Genes

75 genes

Non-Coding Genes

8 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Dna invertase-like proteinBI317_RS27315Not AvailableNegative16866 - 170396339.73
xopg/hoph/avrptoh family type iii secretion system effectorBI317_RS25355Not AvailablePositive17244 - 1792125125.9
resolvaseBI317_RS27790Not AvailableNegative18128 - 1841110292.5
CinBI317_RS25375Not AvailableNegative18443 - 1900920175.2
abrb/maze/spovt family dna-binding domain-containing proteinBI317_RS25380Not AvailablePositive19191 - 194428794.73
type ii toxin-antitoxin system vapc family toxinBI317_RS25385Not AvailablePositive19439 - 1983413729.6
Putative baseplate j-like proteinBI317_RS25390Not AvailableNegative20030 - 2033511296.8
Tail completion proteinBI317_RS25400Not AvailableNegative21021 - 2147317130.9
Predicted tail completionBI317_RS25405Not AvailableNegative21461 - 2188015254.3
Signal peptide proteinBI317_RS25410Not AvailableNegative21877 - 220886943.99

Displaying genes 1 – 10 of 136 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.