Xanthomonas hortorum pv. gardneri strain ICMP 7383

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas hortorum pv. gardneri strain ICMP 7383 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility and environmental adaptability. This strain is notable for having two replicons, indicating a complex genetic structure that may support its pathogenicity and ecological interactions. The strain is cataloged under the accessions NZ_CP018733.1 and NZ_CP018734.1, which provide a basis for its genomic study and classification within the Xanthomonas genus. The presence of two replicons suggests a potential for diverse genetic traits, which can include factors related to virulence, resistance to environmental stressors, and metabolic versatility. In terms of its ecological role, Xanthomonas hortorum pv. gardneri is known to interact with plant hosts, often leading to diseases that can affect agricultural productivity. Understanding the genetic makeup of this strain, particularly through its replicons, can provide insights into its mechanisms of infection and survival strategies in various environments. This knowledge is essential for developing effective management strategies against the diseases it may cause in crops, emphasizing the importance of microbial research in agriculture and plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas hortorum
Strainpv. gardneri strain ICMP 7383

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas hortorum pv. gardneri strain ICMP 7383
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas hortorum pv. gardneri strain ICMP 7383


Gene Summary

Adenine Count

12163 bp

Thymine Count

12535 bp

Guanine Count

18636 bp

Cytosine Count

18506 bp

Genome Length

61840 bp

Protein-coding Genes

75 genes

Non-Coding Genes

8 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Is1404 transposaseBI317_RS26960Not AvailableNegative22134 - 2322138861.4
Hypothetical proteinBI317_RS25430Not AvailableNegative23438 - 26308106459.0
acyltransferase family proteinBI317_RS25230Not AvailablePositive225 - 126539060.6
sulp family inorganic anion transporterBI317_RS25235Not AvailableNegative1374 - 167911699.7
is5 family transposaseBI317_RS25240Not AvailableNegative1698 - 250430301.5
sulp family inorganic anion transporterBI317_RS25245Not AvailableNegative2548 - 318925032.8
sulp family inorganic anion transporterBI317_RS25250Not AvailableNegative3286 - 34355670.24
hypothetical proteinBI317_RS25255Not AvailableNegative3912 - 445120078.2
sulp family inorganic anion transporterBI317_RS25260Not AvailableNegative4638 - 491210817.8
sulp family inorganic anion transporterBI317_RS27345Not AvailableNegative4934 - 727584713.5

Displaying genes 11 – 20 of 136 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.