Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | VSVS12_RS19560 | Not Available | Negative | 1074953 - 1075471 | 19946.8 |
| 2-hydroxyacid dehydrogenase | VSVS12_RS19565 | P52643 | Positive | 1075905 - 1076900 | 36695.9 |
| lon protease family protein | VSVS12_RS19570 | P75867 | Negative | 1076971 - 1079331 | 88153.0 |
| hypothetical protein | VSVS12_RS19575 | Not Available | Positive | 1079561 - 1080055 | 18954.6 |
| lysr family transcriptional regulator | VSVS12_RS19580 | Not Available | Negative | 1080091 - 1080990 | 33395.4 |
| hypothetical protein | VSVS12_RS19585 | Not Available | Negative | 1081396 - 1081746 | 12949.8 |
| ykgj family cysteine cluster protein | VSVS12_RS19590 | Not Available | Negative | 1081883 - 1082179 | 11369.5 |
| hypothetical protein | VSVS12_RS19595 | Not Available | Positive | 1082091 - 1082291 | 7198.66 |
| duf1456 family protein | VSVS12_RS19600 | Not Available | Negative | 1082470 - 1082934 | 18041.7 |
| pbpra1643 family swim/sec-c metal-binding motif protein | VSVS12_RS19605 | Not Available | Positive | 1083279 - 1083611 | 12211.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



