Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron chelate abc transporter atp-binding protein vctc | VSVS12_RS19510 | P94420 | Negative | 1062428 - 1063183 | 28229.3 |
| iron chelate uptake abc transporter permease subunit vctg | VSVS12_RS19515 | P94419 | Negative | 1063191 - 1064141 | 34904.1 |
| iron chelate uptake abc transporter permease subunit vctd | VSVS12_RS19520 | P94418 | Negative | 1064131 - 1065066 | 33505.3 |
| siderophore abc transporter substrate-binding protein | VSVS12_RS19525 | Not Available | Negative | 1065132 - 1066040 | 33379.6 |
| rna-binding s4 domain-containing protein | VSVS12_RS19530 | Not Available | Negative | 1066305 - 1066877 | 20822.1 |
| eal domain-containing protein | VSVS12_RS19535 | O34311 | Positive | 1067216 - 1068994 | 67665.5 |
| abc transporter atp-binding protein | VSVS12_RS19540 | P33916 | Negative | 1069038 - 1070681 | 60701.6 |
| abc transporter permease | VSVS12_RS19545 | P33915 | Negative | 1070681 - 1071724 | 39232.0 |
| microcin c abc transporter permease yejb | VSVS12_RS19550 | P0AFU1 | Negative | 1071784 - 1072872 | 40618.0 |
| extracellular solute-binding protein | VSVS12_RS19555 | P33913 | Negative | 1072883 - 1074700 | 69862.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



