Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VSVS12_RS23505 | Not Available | Negative | 1046355 - 1046489 | 4642.77 |
| excinuclease abc subunit uvrb | VSVS12_RS19465 | B4ESU7 | Negative | 1046744 - 1048732 | 74793.5 |
| hypothetical protein | VSVS12_RS19470 | Not Available | Positive | 1049082 - 1051412 | 86716.7 |
| smi1/knr4 family protein | VSVS12_RS19475 | Not Available | Negative | 1051530 - 1052138 | 22695.2 |
| atp-dependent dna helicase recq | VSVS12_RS19480 | Q0WVW7 | Positive | 1052506 - 1054470 | 72941.7 |
| catalase/peroxidase hpi | VSVS12_RS19485 | A7MZ01 | Negative | 1054557 - 1056737 | 80977.0 |
| acetate/propionate family kinase | VSVS12_RS19490 | Q9KMT5 | Negative | 1056988 - 1058181 | 42681.0 |
| tonb-dependent siderophore receptor | VSVS12_RS19495 | Not Available | Negative | 1058760 - 1060769 | 73908.7 |
| helix-turn-helix transcriptional regulator | VSVS12_RS19500 | Not Available | Positive | 1060885 - 1061865 | 36442.1 |
| cu(i)-responsive transcriptional regulator | VSVS12_RS19505 | A5F2W6 | Positive | 1061934 - 1062323 | 14537.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



