Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nodulation protein nfed | VSVS12_RS19415 | O59179 | Positive | 1031067 - 1032524 | 51378.4 |
| slipin family protein | VSVS12_RS19420 | O28852 | Positive | 1032534 - 1033313 | 29343.8 |
| succinylglutamate desuccinylase/aspartoacylase family protein | VSVS12_RS19425 | Not Available | Negative | 1033473 - 1034468 | 36472.8 |
| putative basic amino acid antiporter yfcc | VSVS12_RS19430 | P39263 | Negative | 1034578 - 1036110 | 54201.8 |
| hypothetical protein | VSVS12_RS19435 | Not Available | Positive | 1036490 - 1036732 | 9339.32 |
| dead/deah box helicase | VSVS12_RS19440 | Not Available | Positive | 1036833 - 1038083 | 45513.6 |
| toxin-antitoxin system ywqk family antitoxin | VSVS12_RS19445 | Not Available | Negative | 1038224 - 1040068 | 70878.6 |
| hypothetical protein | VSVS12_RS19450 | Not Available | Negative | 1040073 - 1042427 | 88221.9 |
| peptidase u32 family protein | VSVS12_RS19455 | P59916 | Positive | 1042825 - 1044822 | 74209.5 |
| branched-chain amino acid transport system ii carrier protein | VSVS12_RS19460 | P71345 | Negative | 1044935 - 1046218 | 45778.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



