Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone napd | VSVS12_RS19315 | Not Available | Positive | 1004797 - 1005117 | 11761.7 |
| periplasmic nitrate reductase subunit alpha | VSVS12_RS19320 | A7N7J3 | Positive | 1005114 - 1007603 | 93088.7 |
| nitrate reductase cytochrome c-type subunit | VSVS12_RS19325 | Q9Z3W3 | Positive | 1007666 - 1008121 | 16807.1 |
| napc/nirt family cytochrome c | VSVS12_RS19330 | P0ABL7 | Positive | 1008153 - 1008731 | 21709.8 |
| tigr02808 family protein | VSVS12_RS19335 | Not Available | Positive | 1008741 - 1008878 | 4915.06 |
| ydch family protein | VSVS12_RS19340 | Not Available | Negative | 1009217 - 1009456 | 8817.56 |
| hlyd family efflux transporter periplasmic adaptor subunit | VSVS12_RS19345 | Not Available | Positive | 1009758 - 1012969 | 118762.0 |
| hypothetical protein | VSVS12_RS19350 | Not Available | Positive | 1012983 - 1013468 | 18157.9 |
| porin | VSVS12_RS19355 | Not Available | Positive | 1013471 - 1014577 | 41840.8 |
| is4 family transposase | VSVS12_RS19360 | Not Available | Positive | 1015291 - 1016499 | 45975.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



