Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycei family protein | VSVS12_RS19265 | C3LVF6 | Negative | 995190 - 995759 | 20416.9 |
| cytochrome b | VSVS12_RS19270 | P75925 | Negative | 995756 - 996295 | 19864.5 |
| is4 family transposase | VSVS12_RS19275 | Not Available | Positive | 996478 - 997686 | 45975.1 |
| duf2164 domain-containing protein | VSVS12_RS19280 | Not Available | Negative | 997773 - 998024 | 9585.36 |
| hypothetical protein | VSVS12_RS19285 | Not Available | Positive | 998129 - 998764 | 24534.1 |
| eal domain-containing protein | VSVS12_RS19290 | Not Available | Positive | 999198 - 999992 | 30156.3 |
| anaerobic c4-dicarboxylate transporter dcuc | VSVS12_RS19295 | Q9KLS6 | Positive | 1000232 - 1001599 | 47473.9 |
| response regulator | VSVS12_RS19300 | P44845 | Negative | 1001694 - 1002326 | 23151.9 |
| nitrate/nitrite two-component system sensor histidine kinase narq | VSVS12_RS19305 | P27896 | Negative | 1002313 - 1004046 | 64368.4 |
| ferredoxin-type protein napf | VSVS12_RS19310 | P0AAL2 | Positive | 1004285 - 1004770 | 17578.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



