Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:proton antiporter nhad | VSVS12_RS15105 | A5F120 | Positive | 53623 - 55056 | 52568.9 |
| hypothetical protein | VSVS12_RS15110 | Not Available | Positive | 55262 - 55591 | 12214.6 |
| dead/deah box helicase | VSVS12_RS15115 | P25888 | Positive | 55735 - 56934 | 44520.0 |
| hypothetical protein | VSVS12_RS22725 | Not Available | Positive | 57038 - 57217 | 6860.17 |
| methylated-dna--[protein]-cysteine s-methyltransferase | VSVS12_RS15120 | Q46EW4 | Negative | 57239 - 57709 | 17017.6 |
| dna-3-methyladenine glycosylase 2 family protein | VSVS12_RS15125 | P9WJW2 | Negative | 57706 - 59091 | 52393.6 |
| hypothetical protein | VSVS12_RS15130 | Not Available | Positive | 59316 - 59519 | 7414.88 |
| lysr family transcriptional regulator | VSVS12_RS15135 | A7FD20 | Negative | 59641 - 60522 | 32807.2 |
| duf413 domain-containing protein | VSVS12_RS15140 | Not Available | Positive | 60770 - 61126 | 13667.0 |
| arginine decarboxylase | VSVS12_RS15145 | Q87JS8 | Positive | 61365 - 63275 | 71834.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



