Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-2 protease family protein | VSVS12_RS19215 | Not Available | Negative | 982551 - 983633 | 40188.9 |
| phna domain-containing protein | VSVS12_RS19220 | Not Available | Positive | 983898 - 984455 | 20576.7 |
| pas domain-containing methyl-accepting chemotaxis protein | VSVS12_RS19225 | P50466 | Negative | 984526 - 986076 | 56889.3 |
| hypothetical protein | VSVS12_RS19230 | Not Available | Negative | 986285 - 986476 | 7269.73 |
| terc/alx family metal homeostasis membrane protein | VSVS12_RS19235 | Q8Z3L5 | Negative | 986778 - 987722 | 34925.8 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | VSVS12_RS19240 | O83142 | Negative | 988173 - 989903 | 63942.9 |
| atp-dependent endonuclease | VSVS12_RS19245 | P75828 | Positive | 990059 - 991690 | 62217.2 |
| duf1097 domain-containing protein | VSVS12_RS19250 | P75916 | Negative | 991798 - 992286 | 17202.3 |
| lysr substrate-binding domain-containing protein | VSVS12_RS19255 | P0ACR6 | Negative | 992511 - 993416 | 34136.4 |
| formate transporter foca | VSVS12_RS19260 | P0AC25 | Positive | 993657 - 995102 | 52145.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



