Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | VSVS12_RS19165 | Not Available | Positive | 971707 - 972663 | 36298.7 |
| d-alanine--d-alanine ligase | VSVS12_RS19170 | A7N512 | Negative | 972690 - 973682 | 36837.6 |
| spor domain-containing protein | VSVS12_RS19175 | Not Available | Negative | 973836 - 974363 | 19239.8 |
| bifunctional acetate--coa ligase family protein/gnat family n-acetyltransferase | VSVS12_RS19180 | Q8ZMX2 | Positive | 974580 - 977279 | 99031.7 |
| lysr family transcriptional regulator | VSVS12_RS19185 | P67661 | Negative | 977425 - 978312 | 32748.6 |
| hypothetical protein | VSVS12_RS19190 | Not Available | Negative | 978828 - 979079 | 9478.96 |
| sgrr family transcriptional regulator | VSVS12_RS19195 | A1JJG7 | Negative | 979063 - 980787 | 66150.1 |
| duf3389 domain-containing protein | VSVS12_RS19200 | Not Available | Negative | 980857 - 981090 | 8278.05 |
| hotdog fold thioesterase | VSVS12_RS19205 | Q9KM09 | Negative | 981102 - 981560 | 16670.1 |
| m48 family metallopeptidase | VSVS12_RS19210 | Q9P7G4 | Positive | 981642 - 982427 | 28232.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



