Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyu family transcriptional regulator | VSVS12_RS19035 | Not Available | Positive | 950861 - 951139 | 10494.7 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | VSVS12_RS19040 | P07001 | Positive | 951433 - 952986 | 54467.9 |
| re/si-specific nad(p)(+) transhydrogenase subunit beta | VSVS12_RS19045 | P43010 | Positive | 953002 - 954384 | 48868.9 |
| sensor histidine kinase vxra | VSVS12_RS19050 | Not Available | Positive | 954689 - 956131 | 54607.0 |
| response regulator transcription factor vxrb | VSVS12_RS19055 | P37478 | Positive | 956106 - 956765 | 24757.6 |
| duf2861 family protein | VSVS12_RS19060 | Not Available | Positive | 956762 - 957640 | 33256.5 |
| conjugal transfer protein traf | VSVS12_RS19065 | Not Available | Positive | 957700 - 958833 | 40777.1 |
| yoah family protein | VSVS12_RS22780 | C3LVI5 | Positive | 958887 - 959045 | 5905.96 |
| hypothetical protein | VSVS12_RS19070 | Not Available | Positive | 959615 - 959968 | 13348.9 |
| duf2726 domain-containing protein | VSVS12_RS19075 | Not Available | Negative | 960021 - 960581 | 21480.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



