Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autoinducer 2-binding periplasmic protein luxp | VSVS12_RS18885 | P54300 | Positive | 913479 - 914576 | 41258.5 |
| quorum-sensing autoinducer 2 sensor kinase/phosphatase luxq | VSVS12_RS18890 | Q9KLK7 | Positive | 914576 - 917143 | 97067.9 |
| pilz domain-containing protein | VSVS12_RS18895 | Not Available | Negative | 917182 - 917847 | 24551.9 |
| glycerol-3-phosphate dehydrogenase | VSVS12_RS18900 | P52111 | Negative | 917908 - 919464 | 58301.8 |
| hypothetical protein | VSVS12_RS18905 | Not Available | Negative | 919556 - 919765 | 8056.62 |
| yccs family putative transporter | VSVS12_RS18910 | P75870 | Negative | 920039 - 922219 | 82033.3 |
| dna helicase iv | VSVS12_RS18915 | P15038 | Positive | 922419 - 924482 | 79529.2 |
| methylglyoxal synthase | VSVS12_RS18920 | Q87ID3 | Negative | 924593 - 925048 | 16969.6 |
| tmao reductase system periplasmic protein tort | VSVS12_RS18925 | P58358 | Negative | 925058 - 926059 | 37028.6 |
| tmao reductase system sensor histidine kinase/response regulator tors | VSVS12_RS18930 | P58356 | Positive | 926140 - 929025 | 106438.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



