Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rimk/lysx family protein | VSVS12_RS18835 | A8H4D4 | Positive | 906543 - 907223 | 25148.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | VSVS12_RS18840 | O08437 | Negative | 907304 - 907777 | 17315.8 |
| thiol:disulfide interchange protein dsba/dsbl | VSVS12_RS18845 | Not Available | Negative | 907795 - 908412 | 22414.0 |
| ompa family protein | VSVS12_RS18850 | P37726 | Positive | 908698 - 909291 | 21492.4 |
| glycerol kinase glpk | VSVS12_RS18855 | C3LW10 | Positive | 909402 - 910907 | 54522.5 |
| ygjv family protein | VSVS12_RS18860 | Not Available | Negative | 911033 - 911263 | 8468.64 |
| duf496 family protein | VSVS12_RS18865 | Q87GT9 | Negative | 911665 - 911985 | 12567.2 |
| hypothetical protein | VSVS12_RS18870 | Not Available | Positive | 912176 - 912370 | 7437.02 |
| yceh family protein | VSVS12_RS18875 | B7VQW9 | Positive | 912404 - 913060 | 23924.4 |
| giy-yig nuclease family protein | VSVS12_RS18880 | Q9KLK4 | Positive | 913053 - 913376 | 12003.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



