Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipocalin family protein | VSVS12_RS18785 | Q08790 | Positive | 896005 - 896523 | 19867.2 |
| s41 family peptidase | VSVS12_RS18790 | Not Available | Positive | 896697 - 897758 | 40362.8 |
| yeee/yede family protein | VSVS12_RS18795 | Q87AD4 | Positive | 898094 - 898513 | 14520.5 |
| yeee/yede family protein | VSVS12_RS18800 | Q87AD3 | Positive | 898521 - 898955 | 15121.0 |
| is4 family transposase | VSVS12_RS18805 | Not Available | Positive | 899065 - 900273 | 45975.1 |
| endonuclease/exonuclease/phosphatase family protein | VSVS12_RS18810 | Not Available | Negative | 900329 - 901327 | 38819.6 |
| anaerobic ribonucleoside-triphosphate reductase | VSVS12_RS18815 | P28903 | Positive | 901529 - 903649 | 79544.3 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | VSVS12_RS18820 | Q9KM76 | Positive | 903715 - 904182 | 17501.9 |
| hypothetical protein | VSVS12_RS18825 | Not Available | Positive | 904356 - 905102 | 27542.9 |
| amino acid aminotransferase | VSVS12_RS18830 | P95468 | Positive | 905302 - 906483 | 42962.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



