Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b/b6 domain-containing protein | VSVS12_RS15055 | Not Available | Negative | 45114 - 45743 | 22726.9 |
| cytochrome c | VSVS12_RS15060 | Not Available | Positive | 45909 - 46340 | 16500.4 |
| hypothetical protein | VSVS12_RS15065 | Not Available | Positive | 46421 - 46876 | 16415.1 |
| class i sam-dependent methyltransferase | VSVS12_RS15070 | B0RCZ0 | Negative | 46914 - 47540 | 23516.6 |
| yaii/yqxd family protein | VSVS12_RS15075 | B7VIS8 | Negative | 47865 - 48323 | 16829.1 |
| dicarboxylate/amino acid:cation symporter | VSVS12_RS15080 | O59010 | Positive | 48751 - 50055 | 45576.8 |
| ykva family protein | VSVS12_RS15085 | Not Available | Negative | 50180 - 50608 | 15358.2 |
| m20 family metallopeptidase | VSVS12_RS15090 | Not Available | Negative | 50756 - 51880 | 40415.3 |
| yjig family protein | VSVS12_RS15095 | P0AEI0 | Negative | 51890 - 52357 | 16247.8 |
| nucleoside recognition domain-containing protein | VSVS12_RS15100 | P39379 | Negative | 52357 - 53082 | 25804.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



